raven-python/.github/workflows/ci.yml at develop · SysBioChalmers/raven-python · GitHub

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name: CI

on:
  push:
    branches: [main]
  pull_request:
  workflow_dispatch:

# A push that obsoletes a previous run cancels it.
concurrency:
  group: ci-${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

jobs:
  lint:
    name: ruff
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: "3.12"
          cache: pip
          cache-dependency-path: pyproject.toml
      - run: pip install --upgrade pip
      # Pinned so the lint result is reproducible (unpinned ruff silently
      # adds rules over time). Keep in sync with the ``dev`` extra in pyproject.
      - run: pip install ruff==0.15.15
      - run: ruff check .

  typecheck:
    name: mypy
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: "3.12"
          cache: pip
          cache-dependency-path: pyproject.toml
      - run: pip install --upgrade pip
      # Installs runtime deps + the dev extra (mypy). Third-party stubs are
      # absent for cobra/optlang/scipy; ignore_missing_imports handles that.
      - run: pip install -e ".[dev]"
      - run: mypy

  test:
    name: pytest (py${{ matrix.python }})
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python: ["3.11", "3.12", "3.13"]
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python }}
          cache: pip
          cache-dependency-path: pyproject.toml
      - run: pip install --upgrade pip
      # ``-e .[dev,excel]`` so every optional extra is exercised.
      # Gurobi is not installable on free runners; the relevant tests
      # skip themselves when ``optlang.gurobi_interface`` cannot import.
      - run: pip install -e ".[dev,excel]"
      - run: pytest -q --maxfail=5 --durations=20

  docs:
    name: docs
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: "3.12"
          cache: pip
          cache-dependency-path: pyproject.toml
      - run: pip install --upgrade pip
      # The package (with autodoc's import-time extras) plus the docs toolchain.
      - run: pip install -e ".[excel]" -r docs/requirements.txt
      # ``-W --keep-going`` keeps the docs build warning-clean; mirrors the
      # ReadTheDocs build (docs/conf.py + .readthedocs.yaml).
      - run: sphinx-build -b html -W --keep-going docs docs/_build/html