python-app.yml

# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

name: Python application

on:
  push:
  pull_request:
    branches: [ "master" ]
  workflow_dispatch:

env:
  CUDA_VISIBLE_DEVICES: 1

permissions:
  contents: read

jobs:
  build:

    runs-on: self-hosted

    steps:
      - uses: actions/checkout@v3

      - name: setup
        run: |
          source ~/.bashrc
          echo "PYXALIGN_CI_TEST_DATA_DIR=$PYXALIGN_CI_TEST_DATA_DIR" >> $GITHUB_ENV
          echo "CONTAINERS_CONF=/local/containers.conf" >> $GITHUB_ENV

      - name: build container
        run: podman build -t localhost/pyxalign-actions-runner-image .

      - name: start container and run pytest
        run: |
          echo  $PYXALIGN_CI_TEST_DATA_DIR
          podman run --rm --env DISPLAY \
            --security-opt label=type:container_runtime_t --network host \
            --device nvidia.com/gpu=all \
            -v="$HOME/.Xauthority:/root/.Xauthority:rw" \
            --env PYXALIGN_CI_TEST_DATA_DIR=$PYXALIGN_CI_TEST_DATA_DIR \
            -v=$PYXALIGN_CI_TEST_DATA_DIR:$PYXALIGN_CI_TEST_DATA_DIR \
            pyxalign-actions-runner-image:latest bash -c \
            "pip install pytest && cd pyxalign && pytest -s"

      - name: container cleanup
        run: |
          podman rmi pyxalign-actions-runner-image